Bagwell C.E., J.A. Rodriguez-Ramos, S.D. Hoyle, S.M. Phillips, F.D. Day-Lewis, and B. Hensel. 2025. "Examination of Coal Combustion Management Sites for Microbiological and Chemical Signatures of Groundwater Impacts." Frontiers in Microbiology 16:Art. No. 1593892. PNNL-SA-209346. doi:10.3389/fmicb.2025.1593892
Kelliher J., F. Rodriguez, L. Johnson, S. Roux, M.L. Smith, A. Clum, and W. Lynch, et al. 2025. "Quantifying the impact of workshops promoting microbiome data standards and data stewardship." Scientific Reports 15:Art. No. 9887. PNNL-SA-214331. doi:10.1038/s41598-025-89991-1
Nieves-Morales R., J.A. Paez-Diaz, S.M. Rodriguez-Carrio, G. Melendez-Martinez, E.O. Rivera-Lopez, J.A. Rodriguez-Ramos, and J. Garcia-Arraras, et al. 2025. "Intestinal microbiome profile of the brown rock sea cucumber (Holothuria glaberrima) using ITS and 16S rDNA amplicons from direct mechanical, enzymatic, and chemical metagenomic extraction." Microbiology Resource Announcements 14, no. 7:e00293-25. PNNL-SA-215122. doi:10.1128/mra.00293-25
Paez-Diaz J.A., R. Nieves-Morales, G. Melendez-Martinez, E.O. Rivera-Lopez, J.A. Rodriguez-Ramos, and C. Rios-Velazquez. 2025. "Characterization of intestinal fungal communities through ITS amplicon from metagenomic libraries of sea cucumber (Holothuria glaberrima)." Microbiology Resource Announcements 14, no. 3:e01320-24. PNNL-SA-215179. doi:10.1128/mra.01320-24
Perez-Santos N., S. Borrero-Villabol, R. Nieves-Morales, J.A. Paez-Diaz, E.O. Rivera-Lopez, J.A. Rodriguez-Ramos, and A.M. Nieves-Rivera, et al. 2025. "Characterization of prokaryotic communities in Puerto Rican caves using 16S rDNA amplicon sequencing." Microbiology Resource Announcements 14, no. 7:e00354-25. PNNL-SA-215178. doi:10.1128/mra.00354-25
Rodriguez-Ramos J.A., N.C. Sadler, E. Zegeye, Y. Farris, S.O. Purvine, S.P. Couvillion, and W.C. Nelson, et al. 2025. "Environmental matrix and moisture influence soil microbial phenotypes in a simplified porous media incubation." mSystems 10, no. 3:Art. No. e01616-24. PNNL-SA-204178. doi:10.1128/msystems.01616-24
2024
Rivera-Lopez E.O., R. Nieves-Morales, G. Melendez-Martinez, J.A. Paez-Diaz, S.M. Rodriguez-Carrio, J.A. Rodriguez-Ramos, and L. Morales-Valle, et al. 2024. "Sea cucumber (Holothuria glaberrima) intestinal microbiome dataset." Data in Brief 54, no. _:Art. No. 110421. PNNL-SA-194202. doi:10.1016/j.dib.2024.110421