Sequencing of microbiome and characterization of metabolome revealed significantly different functions of fine root systems from four temperate tree species in a 26-year-old common garden forest.

In soil, microbes produce and consume methane. Using a technique called pool dilution, researchers can separate the rate of methane production and consumption from the net rate.

Spatial proteomics enables researchers to link protein measurements to features in the image of a tissue sample, which are lost using standard approaches.

A streamlined informatics workflow that automatically processes complex data and provides the locations of double bonds in lipids.

The new PTM-Psi workflow opens the door for uncovering molecular insights within proteomics datasets.

Hi-C metagenomics-informed phage-host infection networks detected in soil pre- and post-drying.

Soil is a massive reservoir of carbon, holding three times the amount of carbon than in the atmosphere. Soil is a massive reservoir of carbon, holding three times the amount of carbon than in the atmosphere.

Scientists screen for nanobodies that recognize wild type and mutant functional proteins to develop a framework to disrupt protein interactions that can cause disease.

High fidelity simulations enabled by high-performance computing will allow for unprecedented predictive power of molecular level processes that are not amenable to experimental measurement.

Scientists can now generate a protein database directly from proteomics data gathered from a specific soil sample using a digital tool and deep learning computer model called Kaiko.

This study profiled the 24-hour rhythmicity in bile salt hydrolase enzyme activity using simple fluorescence assay and the results showed that this rhythmicity is influenced by feeding patterns of the host.

The popular approach of organizing soil bacteria into fast- or slow-growing groups is problematic because most bacteria grow at comparable rates in soil.

Metabolomics analysis revealed differences in metabolome profiles for two distinct modes of fungal wood decay.

SAGE is a high-efficiency genome integration strategy for bacteria that makes the stable introduction of new traits simple for newly discovered microbes.

Variations in burn severity are a key control on the chemical constituents of dissolved organic matter delivered to streams within a single burn perimeter.

First-of-its-kind genomic catalog lends insight into previously unknown processes at the river’s edge.

A multi-omics analysis provides the framework for gaining insights into the structure and function of microbial communities across multiple habitats on a planetary scale

A rich and largely untapped reservoir of lipids in soil environments was used to examine microorganisms’ physiological responses to drying-rewetting cycles.

Snekmer is an application for building and searching protein family models and novel sequence clusters.

PNNL researchers discovered a faster, more economical method to verify the amount of biofuel in mixtures of bio and fossil fuel.