Skip to main content

PNNL

  • About
  • News & Media
  • Careers
  • Events
  • Research
    • Scientific Discovery
      • Biology
        • Chemical Biology
        • Computational Biology
        • Ecosystem Science
        • Human Health
          • Cancer Biology
          • Exposure Science & Pathogen Biology
        • Integrative Omics
          • Advanced Metabolomics
          • Chemical Biology
          • Mass Spectrometry-Based Measurement Technologies
          • Spatial and Single-Cell Proteomics
          • Structural Biology
        • Microbiome Science
          • Biofuels & Bioproducts
          • Human Microbiome
          • Soil Microbiome
          • Synthetic Biology
        • Predictive Phenomics
      • Chemistry
        • Computational Chemistry
        • Chemical Separations
        • Chemical Physics
        • Catalysis
      • Earth & Coastal Sciences
        • Global Change
        • Atmospheric Science
          • Atmospheric Aerosols
          • Human-Earth System Interactions
          • Modeling Earth Systems
        • Coastal Science
        • Ecosystem Science
        • Subsurface Science
        • Terrestrial Aquatics
      • Materials Sciences
        • Materials in Extreme Environments
        • Precision Materials by Design
        • Science of Interfaces
        • Solid Phase Processing
          • Cold Spray
          • Friction Stir Welding & Processing
          • ShAPE
      • Nuclear & Particle Physics
        • Dark Matter
        • Fusion Energy Science
        • Neutrino Physics
      • Quantum Information Sciences
    • Energy Resiliency
      • Electric Grid Modernization
        • Emergency Response
        • Grid Analytics
          • AGM Program
          • Tools and Capabilities
        • Grid Architecture
        • Grid Cybersecurity
        • Grid Energy Storage
        • Transmission
        • Distribution
      • Energy Efficiency
        • Appliance and Equipment Standards
        • Building Energy Codes
        • Building Technologies
          • Advanced Building Controls
          • Advanced Lighting
          • Building-Grid Integration
        • Building and Grid Modeling
        • Commercial Buildings
        • Federal Buildings
          • Federal Performance Optimization
          • Resilience and Security
        • Residential Buildings
          • Building America Solution Center
          • Energy Efficient Technology Integration
          • Home Energy Score
        • Energy Efficient Technology Integration
      • Energy Storage
        • Electrochemical Energy Storage
        • Flexible Loads and Generation
        • Grid Integration, Controls, and Architecture
        • Regulation, Policy, and Valuation
        • Science Supporting Energy Storage
        • Chemical Energy Storage
      • Environmental Management
        • Waste Processing
        • Radiation Measurement
        • Environmental Remediation
      • Fossil Energy
        • Subsurface Energy Systems
        • Carbon Management
          • Carbon Capture
          • Carbon Storage
          • Carbon Utilization
        • Advanced Hydrocarbon Conversion
      • Nuclear Energy
        • Fuel Cycle Research
        • Advanced Reactors
        • Reactor Operations
        • Reactor Licensing
      • Renewable Energy
        • Solar Energy
        • Wind Energy
          • Wind Resource Characterization
          • Wildlife and Wind
          • Community Values and Ocean Co-Use
          • Wind Systems Integration
          • Wind Data Management
          • Distributed Wind
        • Marine Energy
          • Environmental Monitoring for Marine Energy
          • Marine Biofouling and Corrosion
          • Marine Energy Resource Characterization
          • Testing for Marine Energy
          • The Blue Economy
        • Hydropower
          • Environmental Performance of Hydropower
          • Hydropower Cybersecurity and Digitalization
          • Hydropower and the Electric Grid
          • Materials Science for Hydropower
          • Pumped Storage Hydropower
          • Water + Hydropower Planning
        • Grid Integration of Renewable Energy
        • Geothermal Energy
      • Transportation
        • Bioenergy Technologies
          • Algal Biofuels
          • Aviation Biofuels
          • Waste-to-Energy and Products
        • Hydrogen & Fuel Cells
        • Vehicle Technologies
          • Emission Control
          • Energy-Efficient Mobility Systems
          • Lightweight Materials
          • Vehicle Electrification
          • Vehicle Grid Integration
    • National Security
      • Chemical & Biothreat Signatures
        • Contraband Detection
        • Pathogen Science & Detection
        • Explosives Detection
        • Threat-Agnostic Biodefense
      • Cybersecurity
        • Discovery and Insight
        • Proactive Defense
        • Trusted Systems
      • Nuclear Material Science
      • Nuclear Nonproliferation
        • Radiological & Nuclear Detection
        • Nuclear Forensics
        • Ultra-Sensitive Nuclear Measurements
        • Nuclear Explosion Monitoring
        • Global Nuclear & Radiological Security
      • Stakeholder Engagement
        • Disaster Recovery
        • Global Collaborations
        • Legislative and Regulatory Analysis
        • Technical Training
      • Systems Integration & Deployment
        • Additive Manufacturing
        • Deployed Technologies
        • Rapid Prototyping
        • Systems Engineering
      • Threat Analysis
        • Advanced Wireless Security
          • 5G Security
          • RF Signal Detection & Exploitation
        • Internet of Things
        • Maritime Security
        • Millimeter Wave
        • Mission Risk and Resilience
    • Data Science & Computing
      • Artificial Intelligence
      • Graph and Data Analytics
      • Software Engineering
      • Computational Mathematics & Statistics
      • Future Computing Technologies
        • Adaptive Autonomous Systems
    • Publications & Reports
    • Featured Research
  • People
    • Inventors
    • Lab Leadership
    • Lab Fellows
    • Staff Accomplishments
  • Partner with PNNL
    • Education
      • Undergraduate Students
      • Graduate Students
      • Post-graduate Students
      • University Faculty
      • University Partnerships
      • K-12 Educators and Students
      • STEM Education
        • STEM Workforce Development
        • STEM Outreach
        • Meet the Team
      • Internships
    • Community
      • Regional Impact
      • Philanthropy
      • Volunteering
    • Industry
      • Available Technologies
      • Industry
      • Industry Partnerships
      • Licensing & Technology Transfer
      • Entrepreneurial Leave
      • Visual Intellectual Property Search (VIPS)
  • Facilities & Centers
    • All Facilities
      • Atmospheric Radiation Measurement User Facility
      • Electricity Infrastructure Operations Center
      • Energy Sciences Center
      • Environmental Molecular Sciences Laboratory
      • Grid Storage Launchpad
      • Institute for Integrated Catalysis
      • Interdiction Technology and Integration Laboratory
      • PNNL Portland Research Center
      • PNNL Seattle Research Center
      • PNNL-Sequim (Marine and Coastal Research)
      • Radiochemical Processing Laboratory
      • Shallow Underground Laboratory

Soil Microbiome Science

  • About
  • Team
  • Research
  • Resources
  • Publications

Breadcrumb

  1. Home
  2. Projects
  3. Soil Microbiome Science

Soil Microbiome Team

Soil SFA Group October 2022

Principal Investigators

Kirsten Hofmockel

Kirsten Hofmockel, Principal Investigator for the Soil Microbiome Science Focus Area and Soil Incubation Thrust Lead

Dr. Kirsten Hofmockel is the Past President of the Soil Ecology Society, an international organization focused on furthering the science, education and awareness of the importance of soils for human and environmental well-being. She serves as a liaison to the U.S. National Committee for Soil Sciences, which advises the National Academies and represents the interests of the U.S. soil science community in the International Union of Soil Sciences. Hofmockel is a Department of Energy Early Career Award recipient for research focused on how plants, microbes and soils interact to influence carbon storage. She is a Sr. Scientist at the Pacific Northwest National Laboratory, where she leads the Soil Microbiome Science Focus Area that investigates the basic biology underpinning how soil microbial community members interact to generate beneficial ecosystem functions. Hofmockel holds a joint appointment in the Department of Agronomy at Iowa State University.

Thrust Leads

 

Ryan McClure_100px

Ryan McClure, Tractable Thrust Lead 
Dr. Ryan McClure is a computational scientist within the Microbiome Science team in the Biological Sciences Division at PNNL. McClure is a member of MicrobiomeSupport and an editor of mSystems.

 

Photo of Sneha Couvillion

Sneha Couvillion, Intermediate Complexity Thrust Lead

Dr. Sneha Couvillion is a a Staff Scientist in the Earth and Biological Sciences Directorate at PNNL. Sneha leads a team investigating the impact of drought on plant root exudate chemodiversity and plant-microbe interactions in the rhizosphere.

 

An image of Amy Zimmerman

Amy Zimmerman, Field Thrust Lead

Dr. Amy Zimmerman is a microbial ecologist on the Systems Biology team at PNNL. Her research experience spans the tree of life, from viruses to bacteria to unicellular eukaryotes.

 

An image of Hyun-Seob Song

Hyun-Seob Song, Cross-Cutting Modeling Thrust Lead

Dr. Hyun-Seob Song is an Assistant Professor and computational biologist at the University of Nebraska. His research focuses development of microbiome, metabolic and biological network interface models.

 

Photo of Shannon Sheridan

Shannon Sheridan, Data Access and Integration Thrust Lead

Shannon Sheridan has a Masters of Library and Information Science and is the research data librarian at PNNL. She focuses on research data management policies, workflows, and publishing for the SFA.

 

Bill Nelson

Bill Nelson, KBase Integration Thrust Lead
Dr. Bill Nelson is a computational scientist in the Biological Sciences Division at PNNL. His research involves working on large, collaborative projects investigating mechanisms by which metabolic interactions contribute to community and ecological function. 

 

Research Collaborators

 

Photo of Nikos Kyrpides

       Nikos Kyrpides, Joint Genome Institute

 

                                   

Steve Norberg

       Steve Norberg, Washington State University

 

 

Photo of Hyun Seob-Song

       Hyun-Seob Song, University of Nebraska

 

 

External Advisory Committee

The EAC provides the SFA with guidance on the scientific impact of our tasks and also provides recommendations for future science goals and strategic themes. The members of the EAC were chosen based on their high academic standing, their knowledge of DOE-BER missions, and their complementary expertise as shown below

 

  • James Tiedje, Michigan State University, Microbial ecology and former BERAC Chair 
  • Susannah Tringe, Joint Genome Institute, Bioinformatics and former DOE-BER Early Career Award Recipient
  • Kelly Wrighton, Colorado State University, Metagenomics and DOE-BER PI
  • Bruce Hungate, Arizona State University, Quantitative microbial ecology and current BERAC Chair
  • Steven Allison, University of California Irvine, Microbial metabolic modeling and DOE-BER PI

Related organizations

EMSL, the Environmental Molecular Sciences Laboratory

Research topics

Soil Microbiome
Microbiome Science
Integrative Omics
Biology
Earth & Coastal Sciences

PNNL

  • Get in Touch
    • Contact
    • Careers
    • Doing Business
    • Environmental Reports
    • Security & Privacy
    • Vulnerability Disclosure Policy
  • Research
    • Scientific Discovery
    • Energy Resiliency
    • National Security
Subscribe to PNNL News
Department of Energy Logo Battelle Logo
Pacific Northwest National Laboratory (PNNL) is managed and operated by Battelle for the Department of Energy
  • YouTube
  • Facebook
  • X (formerly Twitter)
  • Instagram
  • LinkedIn