February 25, 2007
Journal Article

Enabling high-throughput data management systems biology: The Bioinformatics Resource Manager

Abstract

The Bioinformatics Resource Manager (BRM) is a problem-solving environment that provides the user with data retrieval, management, analysis and visualization capabilities through all aspects of an experimental study. Designed in collaboration with biologists, BRM simplifies the integration of experimental data across platforms and with other publicly available information from external data sources. An analysis pipeline is facilitated within BRM by the seamless connectivity of user data with visual analytics tools, through reformatting of the data for easy import. BRM is developed using JAVATM and other open source technologies so that it can be freely distributable.

Revised: July 12, 2007 | Published: February 25, 2007

Citation

Shah A.R., M. Singhal, K.R. Klicker, E.G. Stephan, H.S. Wiley, and K.M. Waters. 2007. Enabling high-throughput data management systems biology: The Bioinformatics Resource Manager. Bioinformatics 23, no. 7:906-909. PNNL-SA-49327. doi:10.1093/bioinformatics/btm031