March 14, 2019
Journal Article

gcamdata: An R Package for Preparation, Synthesis, and Tracking of Input Data for the GCAM Integrated Human-Earth Systems Model

Abstract

The increasing data requirements of complex models demand robust, reproducible, and transparent systems to track and prepare models’ inputs. Here we describe version 1.0 of the gcamdata R package that processes raw inputs to produce the hundreds of XML files needed by the GCAM integrated human-earth systems model. It features extensive functional and unit testing, data tracing and visualization, and enforces metadata, documentation, and flexibility in its component data-processing subunits. Although this package is specific to GCAM, many of its structural pieces and approaches should be broadly applicable to, and reusable by, other complex model/data systems aiming to improve transparency, reproducibility, and flexibility.

Revised: April 1, 2019 | Published: March 14, 2019

Citation

Bond-Lamberty B., K.R. Dorheim, Y. Cui, R.L. Horowitz, A.C. Snyder, K.V. Calvin, and L. Feng, et al. 2019. gcamdata: An R Package for Preparation, Synthesis, and Tracking of Input Data for the GCAM Integrated Human-Earth Systems Model. Journal of Open Research Software 7, no. 1:Article No. 6. PNNL-SA-135553. doi:10.5334/jors.232