June 2, 2017
Journal Article

Profiling microbial lignocellulose degradation and utilization by emergent omics technologies

Abstract

The use of plant materials to generate renewable biofuels and other high-value chemicals is the sustainable and preferable option, but will require considerable improvements to increase the rate and efficiency of lignocellulose depolymerization. This review highlights novel and emergent technologies that are being developed and deployed to characterize the process of lignocellulose degradation. The review will also illustrate how microbial communities deconstruct and metabolize lignocellulose by identifying the necessary genes and enzyme activities along with the reaction products. These technologies include multi-omic measurements, cell sorting and isolation, nuclear magnetic resonance spectroscopy (NMR), activity-based protein profiling, and direct measurement of enzyme activity. The recalcitrant nature of lignocellulose necessitates the need to characterize the methods microbes employ to deconstruct lignocellulose to inform new strategies on how to greatly improve biofuel conversion processes. New technologies are yielding important insights into microbial functions and strategies employed to degrade lignocellulose, providing a mechanistic blueprint to advance biofuel production.

Revised: January 12, 2021 | Published: June 2, 2017

Citation

Rosnow J.J., L.N. Anderson, R.N. Nair, E.S. Baker, and A.T. Wright. 2017. Profiling microbial lignocellulose degradation and utilization by emergent omics technologies. Critical Reviews in Biotechnology 37, no. 5:626-640. PNNL-SA-116817. doi:10.1080/07388551.2016.1209158