February 22, 2018
Journal Article

Landscape Topography Structures the Soil Microbiome in Arctic Polygonal Tundra

Abstract

Global temperature increases are resulting in thaw of permafrost soil in the arctic with increased emission of greenhouse gases (GHGs). Soil microorganisms are responsible for degradation of the trapped organic carbon (C) in permafrost and emission of GHG as it thaws. However, environmental factors governing microbial degradation of soil C and GHG emissions are poorly understood. Here we determined the functional potential of soil microbiomes in arctic tundra across a cryoperturbed polygonal landscape in Barrow, Alaska. Using a combination of metagenome sequencing and gas flux measurements, we found that the soil microbiome composition, diversity and functional potential varied across the polygon transect and that specific microbes and functional genes were correlated to GHG measurements. Several draft genomes of novel species were obtained with genes encoding enzymes involved in cycling of complex organic compounds. These results have larger implications for prediction of the influence of the soil microbiome on soil C flux from arctic regions undergoing environmental change.

Revised: April 16, 2020 | Published: February 22, 2018

Citation

Tas N., E. Prestat, S. Wang, Y. Wu, C. Ulrich, T.J. Kneafsey, and S.G. Tringe, et al. 2018. Landscape Topography Structures the Soil Microbiome in Arctic Polygonal Tundra. Nature Communications 9. PNNL-SA-126595. doi:10.1038/s41467-018-03089-z