Early stages of type 1 diabetes (T1D) are characterized by local autoimmune inflammation and progressive loss of insulin-producing pancreatic ß cells. We show here that exposure to pro-inflammatory cytokines unmasks a marked plasticity of the ß-cell regulatory landscape. We expand the repertoire of human islet regulatory elements by mapping stimulusresponsive enhancers linked to changes in the ß-cell transcriptome, proteome and 3D chromatin structure. Our data indicates that the ß cell response to cytokines is mediated by the induction of novel regulatory regions as well as the activation of primed regulatory elements pre-bound
by islet-specific transcription factors. We found that T1D-associated loci are enriched of the newly mapped cis-regulatory regions and identify T1Dassociated variants disrupting cytokine-responsive enhancer activity in human ß cells. Our study illustrates how ß cells respond to a proinflammatory environment and implicate a role for stimulus-response islet
enhancers in T1D.
Revised: April 8, 2020 |
Published: November 1, 2019
Citation
Romas-Rodriquez M., H. Raurell-Vila, M.L. Colli, M.I. Alvelos, M. Subirana, J.J. Mateu, and R. Norris, et al. 2019.The impact of proinflammatory cytokines on the ß-cell regulatory landscape provides new insights into the genetics of type 1 diabetes.Nature Genetics 51, no. 11:1588–1595.PNNL-SA-141684.doi:10.1038/s41588-019-0524-6