March 17, 2020
Journal Article

Ecological assembly processes are coordinated between bacterial and viral communities in fractured shale ecosystems

Abstract

The ecological drivers that concurrently act upon both a virus and its host and that drive community assembly are poorly understood despite known interactions between viral populations and their microbial hosts. Hydraulically fractured shale environments provide access to a closed ecosystem in the deep subsurface where constrained microbial and viral community assembly processes can be examined. Here, we used metagenomic analyses of time-resolved-produced fluid samples from two wells in the Appalachian Basin to track viral and host dynamics and to investigate community assembly processes. Hypersaline conditions within these ecosystems should drive microbial community structure to a similar configuration through time in response to common osmotic stress. However, viral predation appears to counterbalance this potentially strong homogeneous selection and pushes the microbial community toward undominated assembly. In comparison, while the viral community was also influenced by substantial undominated processes, it assembled, in part, due to homogeneous selection. When the overall assembly processes acting upon both these communities were directly compared with each other, a significant relationship was revealed, suggesting an association between microbial and viral community development despite differing selective pressures. These results reveal a potentially important balance of ecological dynamics that must be in maintained within this deep subsurface ecosystem in order for the microbial community to persist over extended time periods. More broadly, this relationship begins to provide knowledge underlying metacommunity development across trophic levels.

Revised: July 6, 2020 | Published: March 17, 2020

Citation

Danczak R.E., R. Daly, M. Borton, J.C. Stegen, S. Roux, K.C. Wrighton, and M. Wilkins. 2020. Ecological assembly processes are coordinated between bacterial and viral communities in fractured shale ecosystems. mSystems 5, no. 2:Article No. e00098-20. PNNL-SA-147222. doi:10.1128/mSystems.00098-20