December 20, 2024
Journal Article

From single cell to spatial multi-omics: unveiling molecular mechanisms in dynamic and heterogeneous systems

Abstract

Single-cell multi-omics and spatial technology have been widely applied to biomedical studies and recently to environmental studies. The cell size detected by single-cell omics ranges from ~2 µm (e.g., Bacillus subtilis) to ~120 µm (e.g., human oocytes). Simultaneous detection of single-cell multi-omics is available to human and plant tissues while limited to microbial samples. Spatial technology enables mapping the detected biomolecules in situ. The recent advances in MALDI-MSI and micro/nanoPOTS for the first time allow the application of spatial multi-omics in highly heterogeneous environmental samples composed of plants, fungi, and bacteria. We envision that these technologies will continue to advance our understanding of unique cell types, their developmental trajectory, and the intercellular signaling and interaction within biological samples.

Published: December 20, 2024

Citation

Wu R., M. Velickovic, and K.E. Burnum-Johnson. 2024. From single cell to spatial multi-omics: unveiling molecular mechanisms in dynamic and heterogeneous systems. Current Opinion in Biotechnology 89, no. _:Art No. 103174. PNNL-SA-198316. doi:10.1016/j.copbio.2024.103174

Research topics