April 10, 2019
Journal Article

Molecular Level Understanding of the Free Energy Landscape in Early Stages of Metal-Organic Framework Nucleation

Abstract

The assembly mechanism of hierarchical materials controlled by the choice of solvent and presence of spectator ions. In this paper, we use enhanced sampling molecular dynamics methods to investigate these effects on the configurational landscape of metal-linker interactions in the early stages of synthesis, using MIL-101(Cr) as a prototypical example. Microsecond-long well-tempered metadynamics (WTmetaD) uncover a complex free energy structural landscape, with distinct crystal (C) and non-crystal (NC) like configurations and their equilibrium population. In presence of ions (Na+, F-), we observe a complex effect on the crystallinity of secondary building units (SBUs), by encouraging/suppressing salt bridges between C configurations and consequently controlling the percentage of defects. Solvent effects are assessed by introducing N, N-dimethylformamide (DMF) instead of water, where SBU adducts are appreciably more stable and compact. These results shed light on how solvent nature and ionic strength impact the free energy of nucleation phenomena that ultimately control materials synthesis and defect formation. The work described in this publication was supported by the US Department of Energy (DOE), Office of Science, Office of Basic Energy Sciences and performed at Pacific Northwest National Laboratory (PNNL). The authors acknowledge the use of the UCL Legion High Performance Computing Facility (Legion @ UCL) and associated support services in the completion of this work. This research used resources of the National Energy Research Scientific Computing Centre, a DOE Office of Science User Facility. Battelle operates PNNL for DOE under Contract DE-AC05-76RL01830.

Revised: May 30, 2019 | Published: April 10, 2019

Citation

Kollias L., D. Cantu Cantu, M.A. Tubbs, R.J. Rousseau, V. Glezakou, and M. Salvalaglio. 2019. Molecular Level Understanding of the Free Energy Landscape in Early Stages of Metal-Organic Framework Nucleation. Journal of the American Chemical Society 141, no. 14:6073-6081. PNNL-SA-137278. doi:10.1021/jacs.9b01829