May 24, 2022
Journal Article

Guanosine Dianions Hydrated by One to Four Water Molecules

Abstract

Intermolecular interactions as those present in molecule…water complexes may profoundly influence the physico-chemical properties of molecules. Here, we carried out an experimentally-computational study on the doubly-deprotonated guanosine monophosphate…water clusters, [dGMP-2H]2-•nH2O (n=1–4), using a combination of negative anion photoelectron spectroscopy (NIPES) with molecular dynamics (MD) and quantum chemical (QM) calculations. Successive addition of water molecules to [dGMP-2H]2- increases the experimental adiabatic detachment (ADE) and vertical detachment energy (VDE) by 0.5 to 0.1 eV, depending on the cluster size. In order to choose the representative conformations, we combined MD simulations with a clustering procedure to identify low energy geometries for which ADEs and VDEs were computed at the CAM-B3LYP/6-31++G(d,p) level. Our results demonstrate that the assumed approach lead to the sound geometries and energetics of the studied micro-solvates since the calculated ADEs and VDEs are in pretty good agreement with the experimental characteristics. The evolution of hydrogen bonding with cluster size indicates possibility of the occurrence of proton transfer for clusters comprising a larger number of water molecules.

Published: May 24, 2022

Citation

Makurat S., Q. Yuan, J. Czub, L. Chomicz-Manka, W. Cao, X. Wang, and J. Rak. 2022. Guanosine Dianions Hydrated by One to Four Water Molecules. The Journal of Physical Chemistry Letters 13, no. 14:3230–3236. PNNL-SA-171710. doi:10.1021/acs.jpclett.2c00512

Research topics