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Fundamental and Computational Sciences Directorate

Staff information

Bin Yang

Metabolomics
Joint Appointment
Pacific Northwest National Laboratory
PO Box 999
MSIN:
Richland, WA 99352

PNNL Publications

2024

  • Adarsh Kumar F., D.C. Bell, Z. Yang, J.S. Heyne, D.M. Santosa, H. Wang, and P. Zuo, et al. 2024. "A Simultaneous Depolymerization and Hydrodeoxygenation Process to Produce Lignin-Based Jet Fuel in Continuous Flow Reactor." Fuel Processing Technology 263, no. _:Art. No. 108129. PNNL-SA-203423. doi:10.1016/j.fuproc.2024.108129

2023

  • Fitria F., J. Liu, and B. Yang. 2023. "Roles of Mineral Matter in Biomass Processing to Biofuels." Biofuels, Bioproducts & Biorefining 17, no. 3:696-717. PNNL-SA-180718. doi:10.1002/bbb.2468
  • Li X., A. Gluth, S. Feng, W. Qian, and B. Yang. 2023. "Harnessing redox proteomics to study metabolic regulation and stress response in lignin-fed Rhodococci." Biotechnology for Biofuels and Bioproducts 16, no. 2024:Art. No. 180. PNNL-SA-189367. doi:10.1186/s13068-023-02424-x
  • Ruan H., Z. Xu, A. Kumar, M. Feng, A.S. Lipton, E.D. Walter, and R. Gieleciak, et al. 2023. "Elucidating the Reaction Pathways of Veratrylglycero-ß-guaiacyl Ether Degradation Over Metal-Free Solid Acid Catalyst with Hydrogen." ChemSusChem 16, no. 6:e202202001. PNNL-SA-175496. doi:10.21203/rs.3.rs-2024037/v1

2022

  • Gluth A., Z. Xu, L.S. Fifield, and B. Yang. 2022. "Advancing biological processing for valorization of plastic wastes." Renewable & Sustainable Energy Reviews 170. PNNL-SA-167906. doi:10.1016/j.rser.2022.112966
  • Xu Z., B. Peng, R. Kitata, C.D. Nicora, K.K. Weitz, Y. Pu, and T. Shi, et al. 2022. "Understanding of bacterial lignin extracellular degradation mechanisms by Pseudomonas putida KT2440 via secretomic analysis." Biotechnology for Biofuels and Bioproducts 15, no. 1:Art. No. 117. PNNL-SA-172168. doi:10.1186/s13068-022-02214-x
  • Yang Z., Z. Xu, M. Feng, J.R. Cort, R. Gieleciak, J.S. Heyne, and B. Yang. 2022. "Lignin-based Jet Fuel and its Blending effect with Conventional Jet Fuel." Fuel 321. PNNL-SA-168716. doi:10.1016/j.fuel.2022.124040

2021

  • Li X., N.J. Day, S. Feng, M.J. Gaffrey, T. Lin, V.L. Paurus, and M.E. Monroe, et al. 2021. "Mass spectrometry-based direct detection of multiple types of protein thiol modifications in pancreatic beta cells under endoplasmic reticulum stress." Redox Biology 46. PNNL-SA-163313. doi:10.1016/j.redox.2021.102111
  • Li X., Z. Xu, A. Gluth, W. Qian, and B. Yang. 2021. "Proteomic approaches for advancing the understanding and application of oleaginous bacteria for bioconversion of lignin to lipid." In Lignin Utilization Strategies: From Processing to Applications. ACS Symposium Series, edited by C.G. Yoo and A. Ragauskas. 61-96. Washington, District Of Columbia:American Chemical Society. PNNL-SA-157920. doi:10.1021/bk-2021-1377.ch004
  • Li X., Z. Xu, J.R. Cort, W. Qian, and B. Yang. 2021. "Lipid production from non-sugar compounds in pretreated lignocellulose hydrolysates by Rhodococcus jostii RHA1." Biomass & Bioenergy 145. PNNL-SA-153203. doi:10.1016/j.biombioe.2021.105970
  • Martin K.D., T. Zhang, T. Lin, A.N. Habowski, R. Zhao, C. Tsai, and W.B. Chrisler, et al. 2021. "Facile one-pot nanoproteomics for label-free proteome profiling of 50-1000 mammalian cells." Journal of Proteome Research 20, no. 9:4452-4461. PNNL-SA-160823. doi:10.1021/acs.jproteome.1c00403
  • Xu Z., C. Pan, X. Li, N. Hao, T. Zhang, M.J. Gaffrey, and Y. Pu, et al. 2021. "Enhancement of Polyhydroxyalkanoate Production by Co-feeding Lignin Derivatives with Glycerol in Pseudomonas putida KT2440." Biotechnology for Biofuels 14, no. 1:Article No. 11. PNNL-SA-157585. doi:10.1186/s13068-020-01861-2

2020

  • Wu X., J. Jiang, C. Wang, J. Liu, Y. Pu, A.J. Ragauskas, and S. Li, et al. 2020. "Lignin-Derived Electrochemical Energy Materials and Systems." Biofuels, Bioproducts & Biorefining 14, no. 3:650-672. PNNL-SA-144600. doi:10.1002/bbb.2083
  • Zhang L., Z. Xu, J.R. Cort, T. Vuorinen, and B. Yang. 2020. "Flowthrough Pretreatment of Softwood under Water-only and Alkali Conditions." Energy and Fuels 34, no. 12:16310-16319. PNNL-SA-157576. doi:10.1021/acs.energyfuels.0c03374

2019

  • Li X., Y. He, L. Zhang, Z. Xu, H. Ben, M.J. Gaffrey, and Y. Yang, et al. 2019. "Discovery of Potential Pathways for Biological Conversion of Poplar Wood to Lipids by Co-Fermentation of Rhodococci Strains." Biotechnology for Biofuels 12. PNNL-SA-136201. doi:10.1186/s13068-019-1395-x
  • Wang H., Y. Pu, A.J. Ragauskas, and B. Yang. 2019. "From Lignin to Valuable Products-Strategies, Challenges, and Prospects." Bioresource Technology 271. PNNL-SA-137687. doi:10.1016/j.biortech.2018.09.072

2018

  • Wang H., H. Wang, E. Kuhn, M.p. Tucker, and B. Yang. 2018. "Production of Jet Fuel Range Hydrocarbons from Hydrodeoxygenation of Lignin over Super Lewis Acid Combined with Metal Catalysts." ChemSusChem 11, no. 1:285-291. PNNL-SA-129978. doi:10.1002/cssc.201701567
  • Wang H., Y. Duan, Q. Zhang, and B. Yang. 2018. "Effects of sugars, furans, and their derivatives on hydrodeoxygenation of biorefinery lignin-rich wastes to hydrocarbons." ChemSusChem 11, no. 15:2562-2568. PNNL-SA-133525. doi:10.1002/cssc.201801401
  • Zhu D., H. Si, P. Zhang, A. Geng, W. Zhang, B. Yang, and W. Qian, et al. 2018. "Genomics and biochemistry investigation on the metabolic pathway of milled wood and alkali lignin-derived aromatic metabolites of Comamonas serinivorans SP-35." Biotechnology for Biofuels 11. PNNL-SA-140577. doi:10.1186/s13068-018-1341-3

2017

  • He Y., X. Li, X. Xue, M.S. Swita, A.J. Schmidt, and B. Yang. 2017. "Biological Conversion of the Aqueous Wastes from Hydrothermal Liquefaction of Algae and Pine Wood by Rhodococci." Bioresource Technology 224. PNNL-SA-121581. doi:10.1016/j.biortech.2016.10.059
  • Wang H., H. Ruan, M. Feng, Y. Qin, H.M. Job, L. Luo, and C. Wang, et al. 2017. "One-Pot Process for Hydrodeoxygenation of Lignin to Alkanes Using Ru-based Bimetallic and Bifunctional Catalysts Supported on Zeolite Y." ChemSusChem 10, no. 8:1846-1856. PNNL-SA-120890. doi:10.1002/cssc.201700160
  • Zhang L., L. Fu, H. Wang, and B. Yang. 2017. "Discovery of Cellulose Surface Layer Conformation by Nonlinear Vibrational Spectroscopy." Scientific Reports 7. PNNL-SA-120731. doi:10.1038/srep44319
  • Zhu D., P. Zhang, C. Xie, W. Zhang, J. Sun, W. Qian, and B. Yang. 2017. "Biodegradation of Alkaline Lignin by Bacillus ligniniphilus L1." Biotechnology for Biofuels 10. PNNL-SA-124233. doi:10.1186/s13068-017-0735-y

2016

  • Wang H., L. Zhang, T. Deng, H. Ruan, X. Hou, J.R. Cort, and B. Yang. 2016. "ZnCl2 Induced Catalytic Conversion of Softwood Lignin to Aromatics and Hydrocarbons." Green Chemistry 18, no. 9:2802-2810. PNNL-SA-115052. doi:10.1039/C5GC02967H
  • Yan L., Y. Pu, M.E. Bowden, A.J. Ragauskas, and B. Yang. 2016. "Physiochemical Characterization of Lignocellulosic Biomass Dissolution by Flowthrough Pretreatment." ACS Sustainable Chemistry & Engineering 4, no. 1:219-227. PNNL-SA-117245. doi:10.1021/acssuschemeng.5b01021
  • Zhang L., Y. Pu, J.R. Cort, A.J. Ragauskas, and B. Yang. 2016. "Revealing the Molecular Structural Transformation of Hardwood and Softwood in Dilute Acid Flowthrough Pretreatment." ACS Sustainable Chemistry & Engineering 4, no. 2:6618-6628. PNNL-SA-120912. doi:10.1021/acssuschemeng.6b01491

2015

  • Jeon J., L. Zhang, J. Lutkenhaus, D.D. Laskar, J.P. Lemmon, D. Choi, and M.I. Nandasiri, et al. 2015. "Controlling Porosity in Lignin-Derived Nanoporous Carbon for Supercapacitor Applications." ChemSusChem 8, no. 3:428-432. PNNL-SA-106038. doi:10.1002/cssc.201402621
  • Wang H., H. Ruan, H. Pei, H. Wang, X. Chen, M.p. Tucker, and J.R. Cort, et al. 2015. "Biomass-derived Lignin to Jet Fuel Range Hydrocarbons via Aqueous Phase Hydrodeoxygenation." Green Chemistry 17, no. 12:5131-5135. PNNL-SA-112582. doi:10.1039/C5GC01534K
  • Zhang L., L. Yan, Z. Wang, D.D. Laskar, M.S. Swita, J.R. Cort, and B. Yang. 2015. "Characterization of Lignin Derived from Water-only and Dilute Acid Flowthrough Pretreatment of Poplar Wood at Elevated Temperatures." Biotechnology for Biofuels 8. PNNL-SA-113147. doi:10.1186/s13068-015-0377-x
  • Zhang L., Z. Lu, L.A. Velarde Ruiz Esparza, L. Fu, Y. Pu, S. Ding, and A.J. Ragauskas, et al. 2015. "Vibrational Spectral Signatures of Crystalline Cellulose Using High Resolution Broadband Sum Frequency Generation Vibrational Spectroscopy (HR-BB-SFG-VS)." Cellulose 22, no. 3:1469-1484. PNNL-SA-105805. doi:10.1007/s10570-015-0588-0

2013

  • Laskar D., B. Yang, H. Wang, and G.J. Lee. 2013. "Pathways for Biomass-Derived Lignin to Hydrocarbon Fuels." Biofuels, Bioproducts & Biorefining 7, no. 5:602-626. PNNL-SA-96098. doi:10.1002/bbb.1422
  • Yan L., D.D. Laskar, S. Lee, and B. Yang. 2013. "Aqueous phase catalytic conversion of agarose to 5-hydroxymethylfurfural by metal chlorides." RSC Advances 3, no. 46:24090-24098. PNNL-SA-89336. doi:10.1039/C3RA43293A

2011

  • Yang B., Z. Dai, S. Ding, and C.E. Wyman. 2011. "Enzymatic Hydrolysis of Cellulosic Biomass." Biofuels 2, no. 4:421-450. PNNL-SA-81187. doi:10.4155/BFS.11.116
  • Yang B., Z. Dai, S. Ding, and C.E. Wyman. 2011. "Review: Enzymatic Hydrolysis of Cellulosic Biomass." Biofuels 2, no. 4:421-450. PNNL-SA-80964. doi:10.4155/bfs.11.116

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