Staff information

PNNL Publications

2025

• Johnston G.P., F. Aydemir, H. Byun, E. De Wit, K.L. Oxford, J.E. Kyle, and J.E. McDermott, et al. 2025. "Multi-platform 'omics' analysis of Nipah virus infection reveals viral glycoprotein modulation of mitochondria." Cell Reports 44, no. 3:115411. PNNL-SA-209082. doi:10.1016/j.celrep.2025.115411

2023

• Leiser O.P., D.L. Auberry, E. Bakker, W.B. Chrisler, K.M. Engbrecht, H.E. Engelmann, and S.J. Fansler, et al. 2023. "Insights from a workplace SARS-CoV-2 specimen collection program, with genomes placed into global sequence phylogeny." PLoS One 18, no. 4:Art. No. e0285042. PNNL-SA-179220. doi:10.1371/journal.pone.0285042

2021

• Ostaszewski M., A. Niarakis, A. Mazein, I. Kuperstein, R. Phair, A. Orta-Resendiz, and V. Singh, et al. 2021. "COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms." Molecular Systems Biology 17, no. 10:e10387. PNNL-SA-168044. doi:10.15252/msb.202110387
• Oxford K.L., J.D. Zucker, J.R. Teuton, and M. Ostaszewski. 2021. "COVID19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms." Molecular Systems Biology 17, no. 10:e10387. PNNL-SA-157722. doi:10.15252/msb.202110387
• Zucker J.D., K. Paneri, S. Mohammad-Taheri, S. Bhargava, P. Kolambkar, C. Bakker, and J.R. Teuton, et al. 2021. "Leveraging Structured Biological Knowledge for Counterfactual Inference: A Case Study of Viral Pathogenesis." IEEE Transactions on Big Data 7, no. 1:25-37. PNNL-SA-154544. doi:10.1109/TBDATA.2021.3050680

2019

• Hutchison J.R., S.M. Brooks, Z.C. Kennedy, T.R. Pope, B. Kaiser, K.D. Victry, and C.L. Warner, et al. 2019. "Polysaccharide-based liquid storage and transport media for non-refrigerated preservation of bacterial pathogens." PLoS One 14, no. 9:e0221831. PNNL-SA-142625. doi:10.1371/journal.pone.0221831
• McClure R.S., J.P. Wendler, J.N. Adkins, J.A. Swanstrom, R. Baric, B. Kaiser, and K.L. Oxford, et al. 2019. "Unified Feature Association Networks through Integration of Transcriptomic and Proteomic Data." PLoS Computational Biology 15, no. 9:e1007241. PNNL-SA-137420. doi:10.1371/journal.pcbi.1007241

2016

• Oxford K.L., J.P. Wendler, J.E. McDermott, R.A. White, J.D. Powell, J.M. Jacobs, and J.N. Adkins, et al. 2016. "The Landscape of Viral Proteomics and Its Potential to Impact Human Health." Expert Review of Proteomics 13, no. 6:579-591. PNNL-SA-116259. doi:10.1080/14789450.2016.1184091