Staff information

PNNL Publications

2025

• Adamczyk P.A., H. Hwang, T. Chang, Y. Gao, E. Baidoo, J. Kim, and B.M. Webb-Robertson, et al. 2025. "The oleaginous yeast Rhodosporidium toruloides engineered for biomass hydrolysate-derived (E)-a-bisabolene production." Metabolic Engineering 90. PNNL-SA-210177. doi:10.1016/j.ymben.2025.02.014
• Bramer L.M., E.S. Nakayasu, J.E. Flores, J. Van Eyk, M. MacCoss, H.M. Parikh, and T.O. Metz, et al. 2025. "Data from a Multi-Year Targeted Proteomics Study of a Longitudinal Birth Cohort of Type 1 Diabetes." Scientific Data 12:Art No. 112. PNNL-SA-201884. doi:10.1038/s41597-024-04249-1
• Flores J.E., A.V. Prymolenna, L.A. Lewis, N.M. Winans, E.K. Eder, W.R. Kew, and R.P. Young, et al. 2025. "nmRanalysis: An Open-Source Web Application for Semi-Automated NMR Metabolite Profiling." Analytical Chemistry 97, no. 13:7037-7046. PNNL-SA-195593. doi:10.1021/acs.analchem.4c05104
• Webb-Robertson B.M., W. Wu, J.E. Flores, L.M. Bramer, F. Syed, S.A. Tersey, and S. May, et al. 2025. "RNA Splicing Events in Circulation Distinguish Individuals With and Without New-Onset Type 1 Diabetes." Journal of Clinical Endocrinology and Metabolism 110, no. 4:1148-1157. PNNL-SA-208201. doi:10.1210/clinem/dgae622

2024

• Webb-Robertson B.M., E.S. Nakayasu, F. Dong, K.C. Waugh, J.E. Flores, L.M. Bramer, and A.A. Schepmoes, et al. 2024. "Decrease in multiple complement protein levels associated with development of islet autoimmunity and type 1 diabetes." iScience 27, no. 2:Art. No. 108769. PNNL-SA-177389. doi:10.1016/j.isci.2023.108769

2023

• Clendinen C.S., J.E. Flores, L.M. Bramer, D.J. Degnan, V.L. Paurus, and Y. Eberlim de Corilo. 2023. Enter Gaussian Mixture Modeling Extensions for Improved False Discovery Rate Estimation in GC-MS Metabolomics. PNNL-33865. Richland, WA: Pacific Northwest National Laboratory. Enter Gaussian Mixture Modeling Extensions for Improved False Discovery Rate Estimation in GC-MS Metabolomics
• Degnan D.J., J.E. Flores, E. Brayfindley, V.L. Paurus, B.M. Webb-Robertson, C.S. Clendinen, and L.M. Bramer. 2023. "Characterizing Families of Spectral Similarity Scores and their Use Cases for Gas Chromatography-Mass Spectrometry Small Molecule Identification." Metabolites 13, no. 10:Art. No. 1101. PNNL-SA-189894. doi:10.3390/metabo13101101
• Degnan D.J., L.M. Bramer, J.E. Flores, V.L. Paurus, Y. Eberlim de Corilo, and C.S. Clendinen. 2023. "Evaluating Retention Index Score Assumptions to Refine GC-MS Metabolite Identification." Analytical Chemistry 95, no. 19:7536-7544. PNNL-SA-181303. doi:10.1021/acs.analchem.2c05783
• Flores J.E., D.M. Claborne, Z.D. Weller, B.M. Webb-Robertson, K.M. Waters, and L.M. Bramer. 2023. "Missing Data in Multi-Omics Integration: Recent Advances Through Artificial Intelligence." Frontiers in Artificial Intelligence 6. PNNL-SA-179732. doi:10.3389/frai.2023.1098308