Staff information

PNNL Publications

2025

• Humphrey J., E. Brophy, R. Kosoy, B. Zeng, E. Coccia, D. Mattei, and A. Ravi, et al. 2025. "Long-read RNA sequencing atlas of human microglia isoforms elucidates disease-associated genetic regulation of splicing." Nature Genetics 57:604-615. PNNL-SA-189265. doi:10.1038/s41588-025-02099-0
• Kim H., D.R. Hall, L.A. Nierves, T. Lin, R. Kitata, T. Shi, and T. Liu. 2025. "The evolution of analytical techniques for multiplex analysis of protein biomarkers." Expert Review of Proteomics 22, no. 7:255-272. PNNL-SA-205884. doi:10.1080/14789450.2025.2529185
• Kitata R., M. Velickovic, Z. Xu, R. Zhao, D. Scholten, R.K. Chu, and D.J. Orton, et al. 2025. "Robust collection and processing for label-free single voxel proteomics." Nature Communications 16:Art No. 547. PNNL-SA-190368. doi:10.1038/s41467-024-54643-x

2024

• Abhange K., R. Kitata, J. Zhang, Y. Wang, M.J. Gaffrey, T. Liu, and V. Gunchick, et al. 2024. "In-depth proteome profiling of small extracellular vesicles isolated from cancer cell lines and patient serum." Journal of Proteome Research 23, no. 1:386-396. PNNL-SA-190106. doi:10.1021/acs.jproteome.3c00614
• Gao Y., H. Kim, R. Kitata, T. Lin, A.C. Swensen, T. Shi, and T. Liu. 2024. "Multiplexed Quantitative Proteomics in Prostate Cancer Biomarker Development." In Current Status of Prostate Cancer: Diagnosis, Biomarkers and Therapies, edited by Semmes, O. John, Nyalwidhe, J.O., Swadesh, K. Das, Fisher, Paul, B. 31-70. PNNL-SA-194316.
• Xu Z., R. Zou, N.C. Horn, R. Kitata, and T. Shi. 2024. "Robust surfactant-assisted one-pot sample preparation for label-free single-cell and nanoscale proteomics." In Mass Spectrometry Based Single Cell Proteomics. Methods in Molecular Biology. vol 2817, edited by A. Vegvari, J. Teppo and R.A. Zubarev. 85 - 96. Totowa, New Jersey:Humana Press. PNNL-SA-191349. doi:10.1007/978-1-0716-3934-4_8

2023

• Tsai C., Y. Wang, C. Hsu, R. Kitata, R.K. Chu, M. Velickovic, and R. Zhao, et al. 2023. "A streamlined tandem tip-based workflow for sensitive nanoscale phosphoproteomics." Communications Biology 6, no. 1:Art. No. 70. PNNL-SA-171979. doi:10.1101/2022.04.12.488038

2022

• Xu Z., B. Peng, R. Kitata, C.D. Nicora, K.K. Weitz, Y. Pu, and T. Shi, et al. 2022. "Understanding of bacterial lignin extracellular degradation mechanisms by Pseudomonas putida KT2440 via secretomic analysis." Biotechnology for Biofuels and Bioproducts 15, no. 1:Art. No. 117. PNNL-SA-172168. doi:10.1186/s13068-022-02214-x