Staff information

PNNL Publications

2025

• Gilliam A.K., N.C. Sadler, X. Li, M.R. Garcia, Z.D. Johnson, M. Velickovic, and Y. Kim, et al. 2025. "Cyanobacterial circadian regulation enhances bioproduction under subjective nighttime through rewiring of carbon partitioning dynamics, redox balance orchestration, and cell cycle modulation." Microbial Cell Factories 24:Art. No. 56. PNNL-SA-206759. doi:10.1186/s12934-025-02665-5
• Kitata R., M. Velickovic, Z. Xu, R. Zhao, D. Scholten, R.K. Chu, and D.J. Orton, et al. 2025. "Robust collection and processing for label-free single voxel proteomics." Nature Communications 16:Art No. 547. PNNL-SA-190368. doi:10.1038/s41467-024-54643-x
• Vandergrift G.W., M. Velickovic, L.Z. Day, B.L. Gorman, S.M. Williams, B. Shrestha, and C.R. Anderton. 2025. "Untargeted Spatial Metabolomics and Spatial Proteomics on the Same Tissue Section." Analytical Chemistry 97, no. 1:392-400. PNNL-SA-202874. doi:10.1021/acs.analchem.4c04462
• Velickovic M., L. Kadam, J. Kim, K. Zemaitis, D. Velickovic, Y. Gao, and R. Wu, et al. 2025. "Advanced multi-modal mass spectrometry imaging reveals functional differences of placental villous compartments at microscale resolution." Nature Communications 16:Art. No. 2061. PNNL-SA-201502. doi:10.1038/s41467-025-57107-y
• Zemaitis K., J.M. Fulcher, R. Kumar, D.J. Degnan, L.A. Lewis, Y. Liao, and M. Velickovic, et al. 2025. "Spatial top-down proteomics for the functional characterization of human kidney." Clinical Proteomics 22:Art. No. 9. PNNL-SA-193767. doi:10.1186/s12014-025-09531-x

2024

• Berrios L., G.D. Bogar, L. Bogar, A. Monterio Venturini, C.E. Willing, A.A. Del Rio, and T. Ansell, et al. 2024. "Ectomycorrhizal fungi alter soil food webs and the functional potential of bacteria communities." mSystems 9, no. 6:Art. No. e00369-24. PNNL-SA-192775. doi:10.1128/msystems.00369-24
• Velickovic D., J. Shapiro, S. Parikh, B.H. Rovin, R.D. Toto, M. Vazquez, and E. Poggio, et al. 2024. "Protein N-glycans in Healthy and Sclerotic Glomeruli in Diabetic Kidney Disease." Journal of the American Society of Nephrology 35, no. 9:1198-1207. PNNL-SA-202058. doi:10.1681/ASN.0000000000000393
• Velickovic M., T.L. Fillmore, I.K. Attah, J.C. Posso Escobar, J.C. Pino, R. Zhao, and S.M. Williams, et al. 2024. "Coupling microdroplet-based sample preparation, multiplexed isobaric labeling, and nanoflow peptide fractionation for deep proteome profiling of tissue microenvironment." Analytical Chemistry 96, no. 32:12973 - 12982. PNNL-SA-194410. doi:10.1021/acs.analchem.4c00523
• Wu R., M. Velickovic, and K.E. Burnum-Johnson. 2024. "From single cell to spatial multi-omics: unveiling molecular mechanisms in dynamic and heterogeneous systems." Current Opinion in Biotechnology 89, no. _:Art No. 103174. PNNL-SA-198316. doi:10.1016/j.copbio.2024.103174

2023

• Gosline S., M. Velickovic, J.C. Pino, L.Z. Day, I.K. Attah, A.C. Swensen, and V.G. Danna, et al. 2023. "Proteome mapping of the human pancreatic islet microenvironment reveals endocrine-exocrine signaling sphere of influence." Molecular & Cellular Proteomics 22, no. 8:Art. No. 100592. PNNL-SA-179489. doi:10.1016/j.mcpro.2023.100592
• Liao Y., J.M. Fulcher, D.J. Degnan, S.M. Williams, L.M. Bramer, D. Velickovic, and K. Zemaitis, et al. 2023. "Spatially resolved top-down proteomics of tissue sections based on a microfluidic nanodroplet sample preparation platform." Molecular & Cellular Proteomics 22, no. 2:Art. No. 100491. PNNL-SA-174522. doi:10.1016/j.mcpro.2022.100491
• Tsai C., Y. Wang, C. Hsu, R. Kitata, R.K. Chu, M. Velickovic, and R. Zhao, et al. 2023. "A streamlined tandem tip-based workflow for sensitive nanoscale phosphoproteomics." Communications Biology 6, no. 1:Art. No. 70. PNNL-SA-171979. doi:10.1101/2022.04.12.488038

2022

• Lukowski J.K., H.M. Olson, M. Velickovic, J. Wang, J.E. Kyle, Y. Kim, and S.M. Williams, et al. 2022. "An optimized approach and inflation media for obtaining complimentary mass spectrometry-based omics data from human lung tissue." Frontiers in Molecular Biosciences 9. PNNL-SA-170826. doi:10.3389/fmolb.2022.1022775
• Velickovic D., Y. Liao, S.M. Thibert, M. Velickovic, C.R. Anderton, J. Voglmeir, and G. Stacey, et al. 2022. "Spatial mapping of plant N-glycosylation cellular heterogeneity inside soybean root nodules provided insights into legume-rhizobia symbiosis." Frontiers in Plant Science 13. PNNL-SA-170175. doi:10.3389/fpls.2022.869281