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Fundamental and Computational Sciences Directorate

Staff information

Jared Shaw

Biosystms Dynamics & Simula
Pacific Northwest National Laboratory
PO Box 999
MSIN: K8-98
Richland, WA 99352

PNNL Publications


  • Walker LR, MM Tfaily, JB Shaw, NJ Hess, L Pasa Tolic, and DW Koppenaal. 2017. "Unambiguous Identification & Discovery of Bacterial Siderophores by Direct Injection 21 Tesla Fourier Transform Ion Cyclotron Resonance Mass Spectrometry." Metallomics 9(1):82-92.  doi:10.1039/c6mt00201c
  • Blair SL, AC Macmillan, GT Drozd, AH Goldstein, RK Chu, L Pasa Tolic, JB Shaw, N Tolic, P Lin, J Laskin, A Laskin, and S Nizkorodov. 2017. "Molecular Characterization of Organosulfur Compounds in Biodiesel and Diesel Fuel Secondary Organic Aerosol." Environmental Science & Technology 51(1):119-127.  doi:10.1021/acs.est.6b03304
  • Park JK, PD Piehowski, CS Wilkins, M Zhou, JA Mendoza, GM Fujimoto, BC Gibbons, JB Shaw, Y Shen, AK Shukla, RJ Moore, T Liu, VA Petyuk, N Tolic, L Pasa Tolic, RD Smith, SH Payne, and S Kim. 2017. "Informed-Proteomics: Open Source Software Package for Top-down Proteomics." Nature Methods 14(9):909-914.  doi:10.1038/nmeth.4388
  • Qiu J, K Yu, X Fei, Y Liu, ES Nakayasu, PD Piehowski, JB Shaw, K Puvar, C Das, X Liu, and ZQ Luo. 2017. "A unique deubiquitinase that deconjugates phosphoribosyl-linked protein ubiquitination." Cell Research 27(7):865-881.  doi:10.1038/cr.2017.66
  • Staley C, AP Ferrieri, MM Tfaily, Y Cui, RK Chu, P Wang, JB Shaw, CK Ansong, HM Brewer, AD Norbeck, LM Markillie, FP do Amaral, T Tuleski, T Pellizzaro, BJ Agtuca, RA Ferrieri, S Tringe, L Pasa Tolic, G Stacey, and M Sadowsky. 2017. "Diurnal Cycling of Rhizosphere Bacterial Communities is Associated with Shifts in Carbon Metabolism." Microbiome 5:Article No. 65.  doi:10.1186/s40168-017-0287-1


  • Shaw JB, EW Robinson, and L Pasa-Tolic. 2016. "Vacuum Ultraviolet Photodissociation and Fourier Transform-Ion Cyclotron Resonance (FT-ICR) Mass Spectrometry: Revisited." Analytical Chemistry 88(6):3019-3023.  doi:10.1021/acs.analchem.6b00148
  • Shaw JB, TY Lin, FE Leach, III, AV Tolmachev, N Tolic, EW Robinson, DW Koppenaal, and L Pasa Tolic. 2016. "21 Tesla Fourier Transform Ion Cyclotron Resonance Mass Spectrometer Greatly Expands Mass Spectrometry Toolbox." Journal of the American Society for Mass Spectrometry 27(12):1929-1936.  doi:10.1007/s13361-016-1507-9


  • Dang X, J Scotcher, S Wu, RK Chu, N Tolic, I Ntai, P Thomas, RT Fellers , BP Early, Y Zheng, KR Durbin, RD LeDuc, JJ Wolff, CJ Thompson, J Pan, J Han, JB Shaw, JP Salisbury, M Easterling, CH Borchers, JS Brodbelt, J Agar, L Pasa-Tolic, N Kelleher, and NL Young. 2014. "The first pilot project of the consortium for top-down proteomics: A status report." Proteomics 14(10):1130-1140.  doi:10.1002/pmic.201300438

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